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Browse materialsMIT 20.440 · Fall 2004

Analysis of Biological Networks (BE.440)

Subjects: Biochemistry · Biology

Art: В. Флемминг, Cell division according to W. Flemming (1882), 1882 · Public domain

Instructors: Prof. John Essigmann, Prof. Ram Sasisekharan
Term: Fall 2004
Level: Graduate
What's inside: 1 lecture note · 1 reading · 15 other files · 5 web pages
Materials open: MIT OCW

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Source: MIT OpenCourseWare 20.440 Analysis of Biological Networks (BE.440), Fall 2004, Prof. John Essigmann, Prof. Ram Sasisekharan — original course page on ocw.mit.edu ↗. License: CC BY-NC-SA 4.0. Study order: MIT's own listing order, section by section. Taken from MIT's published course files, downloaded from ocw.mit.edu on September 23, 2026. How RedLectern is built.

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Lecture Notes

7 files

Projects

The Grant Application ProcessPDF Download

Other materials from this course

7 files

MIT OpenCourseWare, Prof. John Essigmann, Prof. Ram Sasisekharan, 20.440 Analysis of Biological Networks (BE.440), Fall 2004.

License: CC BY-NC-SA 4.0 · Edition: Fall 2004 · Open the original course on OCW ↗

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Analysis of Biological Networks (BE.440)

Before you start

What's here, and what isn't

Not included here

Materials by section

Lecture Notes

Projects

Other materials from this course

Lecture 1: Course Introduction Model networks involved in signaling - Signals that start outside of the cell (role of the ECM) and trigger cascades inside the cell, ultimately affecting gene expression

Lecture 3: Decoding Information I (Transcription Regulation)

Lecture 4: Modeling Macromolecular Structure I Individual Homework Assignments

Lecture 5: Decoding Information II (Translation)

Lecture 6: Modeling Macromolecular Structure II Students Present Homework

Lecture 7: Roundtable Discussion

Lecture 8: How to Write an NIH Grant Proposal

Lecture 9: Analysis of the Interferon Network (The JAK/STAT System)

Lecture 10: Analysis of the Interferon Network

Lecture 11: Analysis of the Interferon Network (cont.)

Lecture 12: Analysis of the Interferon Network (cont.)

Lecture 13: Roundtable 1: Students Present Model Projects on Apoptosis

Lecture 14: Chemotaxis I - How Salvage Pathways Supplement Core Biochemical Pathways The Che System Receptor Methylation as a Mechanism of Control of Chemotaxis

Lecture 15: Chemotaxis II - How CheY(P) Signals to the Flagellar Motor Chemiosmotic Coupling Chemotaxis III. Proton Pumps

Lecture 16: Introduction to the Extracellular Matrix Roundtable 2 Will be Delayed for a Few Weeks

Lecture 17: Epithelial Cell Morphogenesis Signaling Hierarchy I

Lecture 18: Epithelial Cell Morphogenesis Signaling Hierarchy II

Lecture 19: Round Table Discussion

Lecture 20: Epithelial Cell Morphogenesis Signaling Hierarchy III

Lecture 21: Roundtable 3

Lecture 22: Changes in Lung Epithelium During Pathogenesis I

Lecture 23: Changes in Lung Epithelium During Pathogenesis II

Lecture 24: Network Example: Functional Glycomics